• Legume Proteomes :
  
  
  Portal dedicated to Genbank Fabaceae family, M. truncatula, G. max and L. japonicus functional annotation (blast, search engine, automatic annotation)
  

  Direct access using keyword:

  
  
  
  
  
• Nicknames : Integrating high throughput data    tutorial
  
  
  This service allows to find very quickly the correspondence between different identifiers representing the same gene in Medicago truncatula, or Glycine Max
  
  
  
• KnowledgeBase : knowledge structuration and representation    tutorial
  
  
  
  
  To represent the 'knowledge' extracted from a publication, we model it as a relationship between one effector and a list of targets that are biological objects. We rely on ontologies when available, but we decided to make this form very simple, to try and promote a broad utilisation by the community. Integration of the Cytoscape software to visualize the large graph
  
  
  
  
  
• Workflows : in silico protocols    tutorial
  
  
  
  
  The 'Workflow' section of the Legoo portal proposes a one-click access to several workflows designed with Remora which provides a user-friendly web interface to design and run BioMoby-based workflows as well as the capability of archiving data and results. E.g. of analysis : from a list of any Medicago truncatula IDs - TIGR TC, MENS, IMGAG, affy, MtOLI16k, etc.-, the workflow retrieves the corresponding IMGAG accessions when possible, get the upstream sequences - 1500bp - and run MEME to identify conserved motifs.
  
  
  
  
  

See all the tutorials : Help/Tutorials